Species: Streptococcus sanguinis
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BM - Buccal Mucosa
KG - Keratinized Gingiva
HP - Hard Palate
TD - Tongue Dorsum
PT - Palatine Tonsils
TH - Throat
SV - Saliva
SupP - Supra-gingival Plaque
SubP - Sub-gingival Plaque
NS - Nasal
ST - Stool
Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
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No Notes
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percent abundance
| SubP | SupP | KG | BM | HP | SV | TH | PT | TD | ST |
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Avg | 3.172 | 4.048 | 0.778 | 0.912 | 0.494 | 0.585 | 0.252 | 0.212 | 0.271 | 0.002 |
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10thp | 0.394 | 0.656 | 0.042 | 0.141 | 0.088 | 0.040 | 0.000 | 0.000 | 0.000 | 0.000 |
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90thp | 7.025 | 7.776 | 2.117 | 2.283 | 1.262 | 1.343 | 0.620 | 0.636 | 0.791 | 0.000 |
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Stdev | 3.898 | 4.194 | 1.330 | 1.159 | 0.589 | 0.572 | 0.387 | 0.320 | 0.769 | 0.007 |
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Prev | 100.000 | 100.000 | 98.701 | 98.701 | 98.701 | 89.610 | 88.312 | 83.117 | 61.039 | 5.195 |
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Notes:
Reads equally close to S. sanguinis and S. agalactiae were assigned to S. sanguinis.
Reads equally close to S. agalactiae, S. infantis clade 638, S. oralis subsp. dentisani clade 058, S. pyogenes, S. sanguinis, and S. sp. HMT 061 and 074 were assigned one-fifth each to S. infantis clade 638, S. oralis subsp. dentisani clade 058, S. sanguinis, and S. sp. HMT 061 and 074.
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percent abundance
| SubP | SupP | KG | BM | HP | SV | TH | PT | TD | ST |
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Avg | 3.072 | 4.670 | 0.568 | 1.020 | 0.495 | 0.772 | 0.255 | 0.201 | 0.099 | 0.001 |
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10thp | 0.206 | 0.785 | 0.000 | 0.085 | 0.049 | 0.125 | 0.000 | 0.000 | 0.000 | 0.000 |
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90thp | 6.238 | 9.009 | 1.264 | 2.218 | 1.097 | 1.530 | 0.746 | 0.379 | 0.203 | 0.000 |
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Stdev | 4.457 | 4.924 | 1.621 | 1.716 | 0.762 | 0.917 | 0.417 | 0.586 | 0.230 | 0.007 |
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Prev | 96.622 | 100.000 | 87.162 | 97.973 | 96.622 | 97.297 | 83.108 | 84.459 | 86.486 | 4.196 |
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From: Dewhirst 35x9 data (not published yet)
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No Notes
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percent abundance
| SubP | SupP | KG | BM | HP | SV | TH | PT | TD | NS |
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Avg | 2.005 | 3.515 | 1.524 | 1.209 | 0.733 | 0.456 | 0.159 | 0.122 | 0.298 | 0.011 |
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10thp | 0.047 | 0.343 | 0.014 | 0.135 | 0.129 | 0.086 | 0.025 | 0.014 | 0.020 | 0.000 |
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90thp | 3.889 | 7.476 | 2.371 | 2.569 | 1.559 | 1.042 | 0.384 | 0.347 | 0.446 | 0.049 |
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Stdev | 4.749 | 3.427 | 3.893 | 1.019 | 0.649 | 0.567 | 0.178 | 0.138 | 0.762 | 0.029 |
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Prev | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 96.970 | 100.000 | 97.059 | 15.000 |
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